Uses of Class
org.episteme.natural.biology.evolution.PhylogeneticTree

Packages that use PhylogeneticTree

Package	Description
org.episteme.natural.biology.loaders.phyloxml	PhyloXML loader for phylogenetic tree data.

Uses of PhylogeneticTree in org.episteme.natural.biology.loaders.phyloxml

Methods in org.episteme.natural.biology.loaders.phyloxml that return PhylogeneticTree

Modifier and Type	Method	Description
PhylogeneticTree	PhyloXMLBridge.toPhylogeneticTree(PhyloXMLDocument doc)	Converts PhyloXML document to Episteme PhylogeneticTree.

Methods in org.episteme.natural.biology.loaders.phyloxml with parameters of type PhylogeneticTree

Modifier and Type	Method	Description
List<Species>	PhyloXMLBridge.extractSpecies(PhylogeneticTree tree)	Extracts all species from a PhyloXML tree.