Uses of Record Class
org.episteme.natural.biology.genetics.PopulationGenetics.AlleleFrequencies

Packages that use PopulationGenetics.AlleleFrequencies

Package	Description
org.episteme.natural.biology.genetics	Biological modeling, genetics, and life science simulations.

Uses of PopulationGenetics.AlleleFrequencies in org.episteme.natural.biology.genetics

Methods in org.episteme.natural.biology.genetics that return PopulationGenetics.AlleleFrequencies

Modifier and Type	Method	Description
static PopulationGenetics.AlleleFrequencies	PopulationGenetics.estimateAlleles(PopulationGenetics.GenotypeFrequencies observed)	Estimates allele frequencies from observed genotypes using maximum likelihood.

Methods in org.episteme.natural.biology.genetics that return types with arguments of type PopulationGenetics.AlleleFrequencies

Modifier and Type	Method	Description
static List<PopulationGenetics.AlleleFrequencies>	PopulationGenetics.simulateSelection(PopulationGenetics.AlleleFrequencies initial, double wAA, double wAa, double waa, int generations)	Projects allele frequency change due to selection.

Methods in org.episteme.natural.biology.genetics with parameters of type PopulationGenetics.AlleleFrequencies

Modifier and Type	Method	Description
static PopulationGenetics.GenotypeFrequencies	PopulationGenetics.calculateHardyWeinberg(PopulationGenetics.AlleleFrequencies alleles)	Hardy-Weinberg Equilibrium: p² + 2pq + q² = 1.
static Real	PopulationGenetics.driftVariance(PopulationGenetics.AlleleFrequencies alleles, int populationSize)	Checks for genetic drift probability using Wright-Fisher model.
static List<PopulationGenetics.AlleleFrequencies>	PopulationGenetics.simulateSelection(PopulationGenetics.AlleleFrequencies initial, double wAA, double wAa, double waa, int generations)	Projects allele frequency change due to selection.