Uses of Class
org.episteme.natural.biology.loaders.biopax.BioPAXInteraction

Packages that use BioPAXInteraction

Package	Description
org.episteme.natural.biology.loaders.biopax	BioPAX loader for biological pathways and networks.

Uses of BioPAXInteraction in org.episteme.natural.biology.loaders.biopax

Subclasses of BioPAXInteraction in org.episteme.natural.biology.loaders.biopax

Modifier and Type	Class	Description
class	BioPAXBiochemicalReaction	BioPAX Biochemical Reaction DTO.
class	BioPAXCatalysis	BioPAX Catalysis DTO.

Methods in org.episteme.natural.biology.loaders.biopax that return types with arguments of type BioPAXInteraction

Modifier and Type	Method	Description
List<BioPAXInteraction>	BioPAXModel.getInteractions()
List<BioPAXInteraction>	BioPAXPathway.getPathwayComponents()
List<BioPAXInteraction>	BioPAXModel.getReactions()

Methods in org.episteme.natural.biology.loaders.biopax with parameters of type BioPAXInteraction

Modifier and Type	Method	Description
void	BioPAXPathway.addComponent(BioPAXInteraction i)
void	BioPAXModel.addInteraction(BioPAXInteraction i)