Uses of Class
org.episteme.natural.biology.loaders.phyloxml.PhyloXMLDocument

Packages that use PhyloXMLDocument

Package	Description
org.episteme.natural.biology.loaders.phyloxml	PhyloXML loader for phylogenetic tree data.

Uses of PhyloXMLDocument in org.episteme.natural.biology.loaders.phyloxml

Subclasses with type arguments of type PhyloXMLDocument in org.episteme.natural.biology.loaders.phyloxml

Modifier and Type	Class	Description
class	PhyloXMLReader	PhyloXML Reader for phylogenetic tree data.

Methods in org.episteme.natural.biology.loaders.phyloxml that return PhyloXMLDocument

Modifier and Type	Method	Description
protected PhyloXMLDocument	PhyloXMLReader.loadFromSource(String resourceId)
PhyloXMLDocument	PhyloXMLReader.read(File file)
PhyloXMLDocument	PhyloXMLReader.read(InputStream input)

Methods in org.episteme.natural.biology.loaders.phyloxml that return types with arguments of type PhyloXMLDocument

Modifier and Type	Method	Description
Class<PhyloXMLDocument>	PhyloXMLReader.getResourceType()

Methods in org.episteme.natural.biology.loaders.phyloxml with parameters of type PhyloXMLDocument

Modifier and Type	Method	Description
PhylogeneticTree	PhyloXMLBridge.toPhylogeneticTree(PhyloXMLDocument doc)	Converts PhyloXML document to Episteme PhylogeneticTree.