Uses of Class
org.episteme.natural.chemistry.biochemistry.AminoAcid

Packages that use AminoAcid

Package	Description
org.episteme.natural.biology
org.episteme.natural.biology.genetics	Biological modeling, genetics, and life science simulations.
org.episteme.natural.chemistry.biochemistry

Uses of AminoAcid in org.episteme.natural.biology

Methods in org.episteme.natural.biology that return AminoAcid

Modifier and Type	Method	Description
AminoAcid	Protein.Residue.getAminoAcidType()

Methods in org.episteme.natural.biology that return types with arguments of type AminoAcid

Modifier and Type	Method	Description
List<AminoAcid>	ProteinSequence.getSequence()

Uses of AminoAcid in org.episteme.natural.biology.genetics

Methods in org.episteme.natural.biology.genetics that return AminoAcid

Modifier and Type	Method	Description
AminoAcid	CodonTable.translate(String codon)	Translates a codon to an Amino Acid.

Uses of AminoAcid in org.episteme.natural.chemistry.biochemistry

Fields in org.episteme.natural.chemistry.biochemistry declared as AminoAcid

Modifier and Type	Field	Description
static final AminoAcid	AminoAcid.ALANINE
static final AminoAcid	AminoAcid.ARGININE
static final AminoAcid	AminoAcid.ASPARAGINE
static final AminoAcid	AminoAcid.ASPARTATE
static final AminoAcid	AminoAcid.CYSTEINE
static final AminoAcid	AminoAcid.GLUTAMATE
static final AminoAcid	AminoAcid.GLUTAMINE
static final AminoAcid	AminoAcid.GLYCINE
static final AminoAcid	AminoAcid.HISTIDINE
static final AminoAcid	AminoAcid.ISOLEUCINE
static final AminoAcid	AminoAcid.LEUCINE
static final AminoAcid	AminoAcid.LYSINE
static final AminoAcid	AminoAcid.METHIONINE
static final AminoAcid	AminoAcid.PHENYLALANINE
static final AminoAcid	AminoAcid.PROLINE
static final AminoAcid	AminoAcid.SERINE
static final AminoAcid	AminoAcid.THREONINE
static final AminoAcid	AminoAcid.TRYPTOPHAN
static final AminoAcid	AminoAcid.TYROSINE
static final AminoAcid	AminoAcid.VALINE

Methods in org.episteme.natural.chemistry.biochemistry that return AminoAcid

Modifier and Type	Method	Description
static AminoAcid	AminoAcid.fromCode(char code)	Looks up amino acid by one-letter code.
static AminoAcid	AminoAcid.valueOf(String name)	Mimics Enum.valueOf().
static AminoAcid[]	AminoAcid.values()	Mimics Enum.values().