Uses of Class
org.episteme.natural.chemistry.Bond

Packages that use Bond

Package	Description
org.episteme.natural.chemistry
org.episteme.natural.chemistry.loaders.cml	Provides the org.episteme.natural.chemistry.loaders.cml module.
org.episteme.natural.ui.viewers.chemistry
org.episteme.natural.ui.viewers.chemistry.backends

Uses of Bond in org.episteme.natural.chemistry

Methods in org.episteme.natural.chemistry that return types with arguments of type Bond

Modifier and Type	Method	Description
List<Bond>	Molecule.getBonds()
List<Bond>	Molecule.getBondsFor(Atom atom)	Gets all bonds connected to an atom.

Methods in org.episteme.natural.chemistry with parameters of type Bond

Modifier and Type	Method	Description
void	Molecule.addBond(Bond bond)

Uses of Bond in org.episteme.natural.chemistry.loaders.cml

Methods in org.episteme.natural.chemistry.loaders.cml that return Bond

Modifier and Type	Method	Description
Bond	CMLBridge.convertBond(CMLBond cmlBond, Map<String,Atom> atomMap)	Converts a CML bond to a Episteme Bond.

Uses of Bond in org.episteme.natural.ui.viewers.chemistry

Methods in org.episteme.natural.ui.viewers.chemistry with parameters of type Bond

Modifier and Type	Method	Description
void	MolecularRenderer.drawBond(Bond bond)	Draw a bond between two atoms.

Uses of Bond in org.episteme.natural.ui.viewers.chemistry.backends

Methods in org.episteme.natural.ui.viewers.chemistry.backends with parameters of type Bond

Modifier and Type	Method	Description
void	JavaFXMolecularRenderer.drawBond(Bond bond)
void	JmolMolecularRenderer.drawBond(Bond bond)
void	PyMOLMolecularRenderer.drawBond(Bond bond)
void	VMDMolecularRenderer.drawBond(Bond bond)