Class PhyloXMLPhylogeny

java.lang.Object

org.episteme.natural.biology.loaders.phyloxml.PhyloXMLPhylogeny

public class PhyloXMLPhylogeny
extends Object

Represents a phylogeny in a PhyloXML document.

Constructor Summary

Constructors

Constructor	Description
PhyloXMLPhylogeny()

Method Summary

Modifier and Type	Method	Description
String	getBranchLengthUnit()
PhyloXMLClade	getClade()
String	getDescription()
String	getName()
boolean	isRooted()
void	setBranchLengthUnit(String branchLengthUnit)
void	setDescription(String description)
void	setName(String name)
void	setRootClade(PhyloXMLClade rootClade)
void	setRooted(boolean rooted)

Methods inherited from class Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Details

PhyloXMLPhylogeny

public PhyloXMLPhylogeny()

Method Details

getName

public String getName()

setName

public void setName(String name)

getDescription

public String getDescription()

setDescription

public void setDescription(String description)

isRooted

public boolean isRooted()

setRooted

public void setRooted(boolean rooted)

getBranchLengthUnit

public String getBranchLengthUnit()

setBranchLengthUnit

public void setBranchLengthUnit(String branchLengthUnit)

getClade

public PhyloXMLClade getClade()

setRootClade

public void setRootClade(PhyloXMLClade rootClade)